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Publications

2017

 

Hiss,M., Schneider,L., Grosche,C., Barth,M.A., Neu,C., Symeonidi,A., Ullrich,K.K., Perroud,P.-F., Schallenberg-Rüdinger,M., Rensing,S.A. (2017). Combination of the Endogenous lhcsr1 Promoter and Codon Usage Optimization Boosts Protein Expression in the Moss Physcomitrella patens. Front. Plant. Sci. 

 
Schallenberg-Rüdinger,M.*, Oldenkott,B., Hiss,M., Trinh,P.L., Knoop,V., and Rensing,S.A. (2017). A Single-Target Mitochondrial RNA Editing Factor of Funaria hygrometrica Can Fully Reconstitute RNA Editing at Two Sites in Physcomitrella patens. Plant Cell Physiol 58, 496-507.

Hiss,M., Meyberg,R., Westermann,J., Haas,F.B., Schneider,L., Schallenberg-Rüdinger,M., Ullrich,K.K., and Rensing,S.A. (2017). Sexual reproduction, sporophyte development and molecular variation in the model moss Physcomitrella patens: introducing the ecotype Reute. Plant J. 90, 606-620.

 

 

2016


Schallenberg-Rüdinger,M. and Knoop,V. (2016). Coevolution of Organelle RNA Editing and Nuclear Specificity Factors in Early Land Plants. In Genomes and Evolution of Charophytes, Bryophytes, Lycophytes and Ferns, S.Rensing, ed. (Amsterdam: Elsevier), pp. 37-93.

 

2015


Schaap,P., Barrantes,I., Minx,P., Sasaki,N., Anderson,R.W., Benard,M., Biggar,K.K., Buchler,N.E., Bundschuh,R., Chen,X., Fronick,C., Fulton,L., Golderer,G., Jahn,N., Knoop,V., Landweber,L.F., Maric,C., Miller,D., Noegel,A.A., Peace,R., Pierron,G., Sasaki,T., Schallenberg-Rüdinger,M., Schleicher,M., Singh,R., Spaller,T., Storey,K.B., Suzuki,T., Tomlinson,C., Tyson,J.J., Warren,W.C., Werner,E.R., Werner-Felmayer,G., Wilson,R.K., Winckler,T., Gott,J.M., Glockner,G., and Marwan,W. (2015). The Physarum polycephalum Genome Reveals Extensive Use of Prokaryotic Two-component and Metazoan-type Tyrosine Kinase Signaling. Genome Biol. Evol.

 

2014


Beike,A.K., von,S.M., Schallenberg-Rüdinger,M., Hanke,S.T., Follo,M., Quandt,D., McDaniel,S.F., Reski,R., Tan,B.C., and Rensing,S.A. (2014). Molecular evidence for convergent evolution and allopolyploid speciation within the Physcomitrium-Physcomitrella species complex. BMC. Evol. Biol. 14, 158.

Hiss,M., Laule,O., Meskauskiene,R.M., Arif,M.A., Decker,E.L., Erxleben,A., Frank,W., Hanke,S.T., Lang,D., Martin,A., Neu,C., Reski,R., Richardt,S., Schallenberg-Rüdinger,M., Szovenyi,P., Tiko,T., Wiedemann,G., Wolf,L., Zimmermann,P., and Rensing,S.A. (2014). Large-scale gene expression profiling data for the model moss Physcomitrella patens aid understanding of developmental progression, culture and stress conditions. Plant J. 79, 530-539.

 

2013


Schallenberg-Rüdinger,M., Kindgren,P., Zehrmann,A., Small,I., and Knoop,V. (2013a). A DYW-protein knockout in Physcomitrella affects two closely spaced mitochondrial editing sites and causes a severe developmental phenotype. Plant J. 76, 420-432.

Schallenberg-Rüdinger,M., Lenz,H., Polsakiewicz,M., Gott,J.M., and Knoop,V. (2013b). A survey of PPR proteins identifies DYW domains like those of land plant RNA editing factors in diverse eukaryotes. RNA. Biol. 10, 1549-1556.

 

2012 


Rüdinger,M.*, Volkmar,U., Lenz,H., Groth-Malonek,M., and Knoop,V. (2012). Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria. J. Mol. Evol. 74, 37-51.

 

2011 


Rüdinger,M., Szövényi,P., Rensing,S.A., and Knoop,V. (2011a). Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica. Plant J. 67, 370-380.

Rüdinger,M., Fritz-Laylin,L., Polsakiewicz,M., and Knoop,V. (2011b). Plant-type mitochondrial RNA editing in the protist Naegleria gruberi. RNA. 17, 2058-2062.

 

2010 


Händeler,K., Wagele,H., Wahrmund,U., Rüdinger,M., and Knoop,V. (2010). Slugs' last meals: molecular identification of sequestered chloroplasts from different algal origins in Sacoglossa (Opisthobranchia, Gastropoda). Mol. Ecol. Resour. 10, 968-978

 

Knoop,V. and Rüdinger,M. (2010). DYW-type PPR proteins in a heterolobosean protist: plant RNA editing factors involved in an ancient horizontal gene transfer? FEBS Lett. 584, 4287-4291.

Lenz,H., Rüdinger,M., Volkmar,U., Fischer,S., Herres,S., Grewe,F., and Knoop,V. (2010). Introducing the plant RNA editing prediction and analysis computer tool PREPACT and an update on RNA editing site nomenclature. Curr. Genet. 56, 189-201.

 

2009-2007


Rüdinger,M., Funk,H.T., Rensing,S.A., Maier,U.G., and Knoop,V. (2009). RNA editing: only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal. Mol. Genet. Genomics 281, 473-481.


Rüdinger,M., Polsakiewicz,M., and Knoop,V. (2008). Organellar RNA editing and plant-specific extensions of pentatricopeptide repeat proteins in jungermanniid but not in marchantiid liverworts. Mol. Biol. Evol. 25, 1405-1414.

Salone,V., Rüdinger,M., Polsakiewicz,M., Hoffmann,B., Groth-Malonek,M., Szurek,B., Small,I., Knoop,V., and Lurin,C. (2007). A hypothesis on the identification of the editing enzyme in plant organelles. FEBS Lett. 581, 4132-4138.


*corresponding author

See also

Google Scholar: Mareike Schallenberg-Rüdinger

 

 

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