header-pbb-personal-marie-v1.webp
© MH

Marie Hagedorn

Research overview

I’m working on specialized plant metabolism, currently focusing on the anthocyanin biosynthetic pathway by integrating molecular biology and bioinformatics.

Beyond the lab, I enjoy creating scientific illustrations to make complex research more accessible. Below, you can find a selection of my recent work.

tpj-figure1.webp
© MH, published in: Choudhary, N., et. al. (2026), Plant J, https://doi.org/10.1111/tpj.71173
TPJ_Review_Figure2.webp
© MH, published in: Choudhary, N., et. al. (2026), Plant J, https://doi.org/10.1111/tpj.71173
Pore-C
© MH, published in: de Oliveira, J.A.V.S., et. al., BMC Genomics (2026), doi: 10.1186/s12864-026-12623-z
Anthocyanin and Carotenoid Pathway
© MH, published in: Choudhary, N., et. al. (2026), Plant J, 127: e71136. doi: 10.1111/tpj.71136
Major steps in a plant genome sequencing project using Oxford Nanopore Technologies (ONT)
© MH, published in: de Oliveira, J.A.V.S., et. al., BMC Genomics (2026), doi: 10.1186/s12864-026-12623-z
Figure_3_V2.2.webp
© MH, published in: Natarajan, S., et. al. (2026), https://zenodo.org/records/21284153

Publications

  • Choudhary N., Hagedorn M., Pucker B. (2026). Out of the blue: Family-wide loss of anthocyanin biosynthesis in Cucurbitaceae. Plant J, 127: e71136. doi: 10.1111/tpj.71136
  • Natarajan S., Hagedorn M., Pucker B. (2026). Functional annotation - how to tackle the bottleneck in plant genomics; doi: 10.5281/zenodo.18762038
  • Choudhary N., Natarajan S., Morweiser C., Grünig N., Hagedorn M., Franke J., Pucker B. (2026). Elucidating and exploring specialised plant metabolism through a pangenomic and pantranscriptomic lens. Plant J, doi: https://doi.org/10.1111/tpj.71173
  • de Oliveira, J.A.V.S., Choudhary, N., Meckoni, S.N., Nowak M.S., Hagedorn M. & Pucker B. (2026). Cookbook for plant genome sequences. BMC Genomics (2026). doi: 10.1186/s12864-026-12623-z.
  • Wolff K., de Oliveira J. A. V. S., Fürstenberg L., Hagedorn M., Garz B., Borchert M., Pucker B. (2026). Genome sequence of the medicinal plant Urtica dioica reveals the genetic basis of the flavonoid metabolism. bioRxiv 2026.05.15.725508; doi: 10.64898/2026.05.15.725508

   Kirschallee1, 53115, Bonn, Germany, Room 2.038

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